Protein ZmMED6_1
ZmMED6_1 is a protein in the MED6 family.
Information
Coreg Name: ZmMED6_1
Species: Maize
Coreg Family: MED6
Gene Name(Synonym):
Uniprot ID: B4FN85
Subgenome: 1

Protein ZmMED6_1

ZmMED6_1 is a protein in the MED6 family.

Overview of domains present in v5 transcripts
PF04934
Zm00001eb372970_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d044902DAPseq no logo sequence fimo position
Zm00001d044902DAPseq no logo sequence fimo position
Zm00001d044902ChIPseq no logo sequence fimo position
Zm00001d044902PChIPseq no logo sequence fimo position

Interactions where ZmMED6_1 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMED6_1 is the target  
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There are 65 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb372970_T001 from maize genome v5

Amino Acid Sequence
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MSATPLPPPGPDGAVALLPPPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIHPLDMSHLTK
MTGMEYLLSEVMEPHLFVIRKQKRESPEKSSPMLAYYILDGSIYQAPQLCNVFASRISRAMHHISKAFTIACSKLEKIGN
VETEPDAVASESKTQKEAIDLKELKRIDHILSSLKRKIGAAPPPPPYPEGYVPPSAEQEKAPDDVAASEAPPQLDPIIDQ
GPSKRPRFQ

MSATPLPPPGPDGAVALLPPPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIHPLDMSHLTK
MTGMEYLLSEVMEPHLFVIRKQKRESPEKSSPMLAYYILDGSIYQAPQLCNVFASRISRAMHHISKAFTIACSKLEKIGN
VETEPDAVASESKTQKEAIDLKELKRIDHILSSLKRKIGAAPPPPPYPEGYVPPSAEQEKAPDDVAASEAPPQLDPIIDQ
GPSKRPRFQ

MSATPLPPPGPDGAVALLPPPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIHPLDMSHLTK
MTGMEYLLSEVMEPHLFVIRKQKRESPEKSSPMLAYYILDGSIYQAPQLCNVFASRISRAMHHISKAFTIACSKLEKIGN
VETEPDAVASESKTQKEAIDLKELKRIDHILSSLKRKIGAAPPPPPYPEGYVPPSAEQEKAPDDVAASEAPPQLDPIIDQ
GPSKRPRFQ

MSATPLPPPGPDGAVALLPPPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIHPLDMSHLTK
MTGMEYLLSEVMEPHLFVIRKQKRESPEKSSPMLAYYILDGSIYQAPQLCNVFASRISRAMHHISKAFTIACSKLEKIGN
VETEPDAVASESKTQKEAIDLKELKRIDHILSSLKRKIGAAPPPPPYPEGYVPPSAEQEKAPDDVAASEAPPQLDPIIDQ
GPSKRPRFQ

MSATPLPPPGPDGAVALLPPPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIHPLDMSHLTK
MTGMEYLLSEVMEPHLFVIRKQKRESPEKSSPMLAYYILDGSIYQAPQLCNVFASRISRAMHHISKAFTIACSKLEKIGN
VETEPDAVASESKTQKEAIDLKELKRIDHILSSLKRKIGAAPPPPPYPEGYVPPSAEQEKAPDDVAASEAPPQLDPIIDQ
GPSKRPRFQ

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF04934
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Nucleotide Sequence
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ATTTTCTCTCTCTTCTATTTCTCTT...

GRMZM2G017537_T01 from maize genome v3


Related TFome: pUT5663

Amino Acid Sequence
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MSATPLPPPGPDGAVALLPPPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIHPLDMSHLTK
MTGMEYLLSEVMEPHLFVIRKQKRESPEKSSPMLAYYILDGSIYQAPQLCNVFASRISRAMHHISKAFTIACSKLEKIGN
VETEPDAVASESKTQKEAIDLKELKRIDHILSSLKRKIGAAPPPPPYPEGYVPPSAEQEKAPDDVAASEAPPQLDPIIDQ
GPSKRPRFQ

Nucleotide Sequence
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ATTTTCTCTCTCTTCTATTTCTCTT...

GRMZM2G017537_T02 from maize genome v3

Amino Acid Sequence
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MSATPLPPPGPDGAVALLPPPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIHPLDMSHLTY
NT

Nucleotide Sequence
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ATTTTCTCTCTCTTCTATTTCTCTT...

GRMZM2G017537_T03 from maize genome v3

Amino Acid Sequence
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MSATPLPPPGPDGAVALLPPPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIHPLDMSHLTK
MTGMEYLLSEVMEPHLFVIRKQKRESPEKSSPMLAYYILDGSIYQAPQLCNVFASRISRAMHHISKAFTIACSKLEKIGN
VETEPDAVASESKTQKEAIDLKELKRIDHILSSLKRKIGAAPPPPPYPEGYVPPSAEQEKAPDDVAASEAPPQLDPIIDQ
GPSKRPRFQ

Nucleotide Sequence
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TCTCTCTTCTATTTCTCTTCTCCGT...

Zm00001d044902_T001 from maize genome v4

Amino Acid Sequence
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MSATPLPPPGPDGAVALLPPPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIHPLDMSHLTK
MTGMEYLLSEVMEPHLFVIRKQKRESPEKSSPMLAYYILDGSIYQAPQLCNVFASRISRAMHHISKAFTIACSKLEKIGN
GYLQNYNYLPPQHTTGKLQQGLCEIAIVITTTKHLDLNKNLKGHTGSATIEHLETEPDAVASESKTQKEAIDLKELKRID
HILSSLKRKIGAAPPPPPYPEGYVPPSAEQEKAPDDVAASEAPPQLDPIIDQGPSKRPRFQ

Nucleotide Sequence
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ATTTTCTCTCTCTTCTATTTCTCTT...

Zm00001d044902_T003 from maize genome v4

Amino Acid Sequence
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MSATPLPPPGPDGAVALLPPPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIHPLDMSHLTK
MTGMEYLLSEVMEPHLFVIRKQKRESPEKSSPMLAYYILDGSIYQAPQLCNVFASRISRAMHHISKAFTIACSKLEKIGN
VETEPDAVASESKTQKEAIDLKELKRIDHILSSLKRKIGAAPPPPPYPEGYVPPSAEQEKAPDDVAASEAPPQLDPIIDQ
GPSKRPRFQ

Nucleotide Sequence
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ACTCGCATCTCGCGGGATCGGACCC...

Zm00001d044902_T004 from maize genome v4

Amino Acid Sequence
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MSATPLPPPGPDGAVALLPPPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIHPLDMSHLTK
MTGMEYLLSEVMEPHLFVIRKQKRESPEKSSPMLAYYILDGSIYQAPQLCNVFASRISRAMHHISKAFTIACSKLEKIGN
VETEPDAVASESKTQKEAIDLKELKRIDHILSSLKRKIGAAPPPPPYPEGYVPPSAEQEKAPDDVAASEAPPQLDPIIDQ
GPSKRPRFQ

Nucleotide Sequence
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ACTCGCATCTCGCGGGATCGGACCC...


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